The detailed information of tRNA gene sequence


Sequence ID>WENV170669670
Genome IDLAHS01001187
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 20783
End posion on genome 20711
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tccattttcc
tRNA gene sequence 
GGGTCAGTAGCTCAGTTGGTAGAGCATTAGATTGAAGCTCTAAGTGTCGGCGGTTCGATT
CCGTCCTGACCCAtcc
Downstream region at tRNA end position 
tttttgcggg
Secondary structure (Cloverleaf model)
>WENV170669670	Phe	GAA
                   c      Atcc tttttgcggg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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