The detailed information of tRNA gene sequence


Sequence ID>WENV170669708
Genome IDLAHS01001462
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 9314
End posion on genome 9401
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acaacttctt
tRNA gene sequence 
GGAAGTTTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCCGTGCACGTTAGTGTA
CCGGGGGTTCGAATCCCCCAGCTTCCGCac
Downstream region at tRNA end position 
ctcatggtcg
Secondary structure (Cloverleaf model)
>WENV170669708	Ser	GCT
                   t      GCac ctcatggtcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCACGTTAGTGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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