The detailed information of tRNA gene sequence


Sequence ID>WENV170669826
Genome IDLAHS01003746
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 5977
End posion on genome 5902
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaacaatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGCCAGGCTCATAACCTGGAGGTCGCATGTTCGAGT
CCTGCCTCCGCAACAA
Downstream region at tRNA end position 
gatggcaccc
Secondary structure (Cloverleaf model)
>WENV170669826	Met	CAT
                   t      ACAA gatggcaccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | |   |     G
    T       C G A G       G C A T G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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