The detailed information of tRNA gene sequence


Sequence ID>WENV170669830
Genome IDLAHS01004072
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1980
End posion on genome 1904
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggaataagcc
tRNA gene sequence 
GGACTTGTAGCTCAGTTGGTTAGAGCAACAGACTCATAATCTGGAGGTCCCAGGTTCAAG
CCCTGGCTGGTCCACAA
Downstream region at tRNA end position 
tgaatatcaa
Secondary structure (Cloverleaf model)
>WENV170669830	Met	CAT
                   c      ACAA tgaatatcaa
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     T   T
                     G - C          C G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A   G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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