The detailed information of tRNA gene sequence


Sequence ID>WENV170669924
Genome IDLAHS01009367
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 219
End posion on genome 144
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgagtatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGCCAGGCTCATAACCTGGAGGTCGCATGTTCGAGT
CTTGCCTCCGCAACTA
Downstream region at tRNA end position 
tagacgcccg
Secondary structure (Cloverleaf model)
>WENV170669924	Met	CAT
                   t      ACTA tagacgcccg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T T C     A
      T G A        G      | | |   |     G
    T       C G A G       G C A T G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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