The detailed information of tRNA gene sequence


Sequence ID>WENV170669939
Genome IDLAHS01009733
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 164
End posion on genome 89
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaataagcat
tRNA gene sequence 
GGGAGCTTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGGGGTCATAGGTTCGAGC
CCTATAGTTCCCACCA
Downstream region at tRNA end position 
tttaaataat
Secondary structure (Cloverleaf model)
>WENV170669939	Val	TAC
                   t      ACCA tttaaataat
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     T - A          C G
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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