The detailed information of tRNA gene sequence


Sequence ID>WENV170670049
Genome IDLAHS01021287
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 390
End posion on genome 302
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ctccaaatgt
tRNA gene sequence 
GCCGGGGTGGCGGAACTGGCAGACGCACAGGACTTAAAATCCTGCGGTAGGTGACTACCG
TGCCGGTTCGATTCCGGCCCTCGGCACCA
Downstream region at tRNA end position 
tttttaatat
Secondary structure (Cloverleaf model)
>WENV170670049	Leu	TAA
                   t      ACCA tttttaatat
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T T
                    T     C G G C C     A
      C A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGTAGGTGACTACCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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