The detailed information of tRNA gene sequence


Sequence ID>WENV170670116
Genome IDLAHS01048586
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 262
End posion on genome 189
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caaaggacag
tRNA gene sequence 
GGTGCGTTGTCCGAACGGTTAGGTACCGGTCTGCAAAACCGCTCAAGGCGGTTCGACTCC
GCCACGCACCTCCA
Downstream region at tRNA end position 
acgggaatcc
Secondary structure (Cloverleaf model)
>WENV170670116	Cys	GCA
                   g      TCCA acgggaatcc
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     C C G C C     A
        A A        G      | | | | |     G
      C     G C C T       G G C G G     C
      G       | |                   T T
      G     A G G T
        T T        A     TCAA
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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