The detailed information of tRNA gene sequence


Sequence ID>WENV170670203
Genome IDLAHS01104639
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 277
End posion on genome 353
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
acaaattgat
tRNA gene sequence 
CGGGATGTAGCACAGTTGGCTAGCGCGCCACGTTCGGGACGTGGAGGTCGGGTGTTCGAG
TCACCTCATCCCGACAA
Downstream region at tRNA end position 
acannnnnnn
Secondary structure (Cloverleaf model)
>WENV170670203	Pro	CGG
                   t      ACAA acannnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C A C     A
      T G A        A      + | | | |     G
    T       C A C G       G G G T G     C
    G       |   | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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