The detailed information of tRNA gene sequence


Sequence ID>WENV170670232
Genome IDLAHT01000191
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 2791
End posion on genome 2704
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagggtcaga
tRNA gene sequence 
GTCGAGGTCGCCTAGCTTGGTATGGCGCAGGTTTGCTAAACCTGTTCCGCTCCGCGGATC
GTGGGTTCGAATCCCACCCTCGGCGCTA
Downstream region at tRNA end position 
ttttaccagt
Secondary structure (Cloverleaf model)
>WENV170670232	Ser	GCT
                   a      GCTA ttttaccagt
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    T       T C C G       G T G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TTCCGCTCCGCGGATC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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