The detailed information of tRNA gene sequence


Sequence ID>WENV170670239
Genome IDLAHT01000333
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 6322
End posion on genome 6408
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ctttctccaa
tRNA gene sequence 
GCCGGAGTGGTGGAATTGGTAGACACAAGGGACTTAAAATCCCTCGGGCTTCGGCTCGTG
CCGGTTCAAGTCCGGCCTCTGGTACCA
Downstream region at tRNA end position 
agcgggaata
Secondary structure (Cloverleaf model)
>WENV170670239	Leu	TAA
                   a      ACCA agcgggaata
                     G + T
                     C - G
                     C - G
                     G + T
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    T       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGGCTTCGGCTCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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