The detailed information of tRNA gene sequence


Sequence ID>WENV170670252
Genome IDLAHT01000565
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 6833
End posion on genome 6908
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctttaacaga
tRNA gene sequence 
CGCGAGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCGAAT
CCTTCCCTCGCTACCA
Downstream region at tRNA end position 
ttttttaaaa
Secondary structure (Cloverleaf model)
>WENV170670252	Met	CAT
                   a      ACCA ttttttaaaa
                     C   T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        G      | | | | |     G
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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