The detailed information of tRNA gene sequence


Sequence ID>WENV170670267
Genome IDLAHT01000748
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 80
End posion on genome 4
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acctgcttgc
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCATGCGTTCGAA
TCGCGTCGGGCCCACCT
Downstream region at tRNA end position 
atcnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170670267	Val	GAC
                   c      ACCT atcnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      C G A        G      | + | | |     G
    T       T C T G       A T G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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