The detailed information of tRNA gene sequence


Sequence ID>WENV170670277
Genome IDLAHT01000924
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 11192
End posion on genome 11119
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggcaacgcaa
tRNA gene sequence 
GGGCCCGTAGCATAGCCCGGTGGTGCGCCCGGCTGATAACCGGGAGGTCATGTGTTCGAA
TCACATCGGGCCCAttc
Downstream region at tRNA end position 
cacatcctct
Secondary structure (Cloverleaf model)
>WENV170670277	Ile	GAT
                   a      Attc cacatcctct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C A C     A
      C G A        A      | | | | |     G
    C       T A C G       A T G T G     C
    C       + | | |                 T T
    G       G T G C
      G T G        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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