The detailed information of tRNA gene sequence


Sequence ID>WENV170670355
Genome IDLAHT01003501
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1706
End posion on genome 1780
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
attttcgtct
tRNA gene sequence 
GGCCCCATAGGATAACGGCTAGTCCACCGGATTCTCAGTCCGAAGGTCGGGGTTCGATTC
CCCGTGGGGCTGCCA
Downstream region at tRNA end position 
gggttaaata
Secondary structure (Cloverleaf model)
>WENV170670355	Glu	CTC
                   t      GCCA gggttaaata
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C A A        A      | | | | |     G
    G       T A G G       C G G G G     C
    G       + | | |                 T T
    C       G T C C
      T A          A     AGGT
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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