The detailed information of tRNA gene sequence


Sequence ID>WENV170670375
Genome IDLAHT01004637
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 16909
End posion on genome 16994
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagattctct
tRNA gene sequence 
GTTGAGGTAGCCAAGCCAGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCCTTGGGACTC
GAGGGTTCAAATCCCTCCCTCAGCGCtc
Downstream region at tRNA end position 
cagaagaatt
Secondary structure (Cloverleaf model)
>WENV170670375	Ser	GCT
                   t      GCtc cagaagaatt
                     G - C
                     T + G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    A       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCCTTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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