The detailed information of tRNA gene sequence


Sequence ID>WENV170670395
Genome IDLAHT01005933
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1926
End posion on genome 1854
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nntatatggc
tRNA gene sequence 
GCCCCAGTGGCTTAGTTGGCAGAGCGGCTGACTTGTAATCAGCAGGTCCCGTGTTCAAAT
CACGGCTGGGGCTtac
Downstream region at tRNA end position 
taacttaagt
Secondary structure (Cloverleaf model)
>WENV170670395	Thr	TGT
                   c      Ttac taacttaagt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     G G C A C     A
      T G A        G      | | | | |     A
    T       T T C G       C C G T G     C
    G       + | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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