The detailed information of tRNA gene sequence


Sequence ID>WENV170670404
Genome IDLAHT01006421
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 4324
End posion on genome 4395
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttgtaggcac
tRNA gene sequence 
GGGCCGATAGATCAGCGGAAGATCGCTTCCTTGGCATGGAAGAGGCCGCGGGTTCAATTC
CCGCTCGGTCCAtct
Downstream region at tRNA end position 
cattcttggg
Secondary structure (Cloverleaf model)
>WENV170670404	Ala	GGC
                   c      Atct cattcttggg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     C G C C C     A
        G A        A      | | | | |     A
      C     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        A A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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