The detailed information of tRNA gene sequence


Sequence ID>WENV170670431
Genome IDLAHT01009694
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 581
End posion on genome 507
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
cgctccagtc
tRNA gene sequence
GCCTCGGTAGCTCAGCCGGTCCAGAGCGATTGACTTGTAATCAATAGGTCGCGTGTTCGA
ATCACGCCCGGGGCTttt
Downstream region at tRNA end position
ccggttaaag
Secondary structure (Cloverleaf model)
>WENV170670431	Thr	TGT
                   c      Tttt ccggttaaag
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C A C     A
    C C G A        A      | | | | |     G
  G         C T C G       G C G T G     C
  G         | | | |                 T T
  T         G A G C
    C C A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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