The detailed information of tRNA gene sequence


Sequence ID>WENV170670432
Genome IDLAHT01009739
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 2514
End posion on genome 2441
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cctagcttga
tRNA gene sequence 
GTCCGGATAGTGTAGAGGCCTATCATGAAGCCCTGTCGAGGCTTCGACCCGGGTTCGACT
CCCGGTCCGGGCGCtt
Downstream region at tRNA end position 
aatttgggcg
Secondary structure (Cloverleaf model)
>WENV170670432	Asp	GTC
                   a      GCtt aatttgggcg
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T C
                    T     G G C C C     A
      A G A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        G     CGAC
                    A - T
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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