The detailed information of tRNA gene sequence


Sequence ID>WENV170670460
Genome IDLAHT01013991
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 124
End posion on genome 38
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ggatttcagg
tRNA gene sequence 
GCGGGGTTTGCCAAGCTGGCCAAAGGCGCGGGACTTAAGATCCCGTCTCGCAGGAGTTCG
CGGGTTCGAATCCCGTACCCCGCATCA
Downstream region at tRNA end position 
ttgatatcga
Secondary structure (Cloverleaf model)
>WENV170670460	Leu	TAA
                   g      ATCA ttgatatcga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
    T C G A        T      + | | | |     G
  G         A C C G       G C G G G     C
  G           | | |                 T T
  C         A G G C
    C A A          G     TCTCGCAGGAGTTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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