The detailed information of tRNA gene sequence


Sequence ID>WENV170670483
Genome IDLAHT01017653
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 5819
End posion on genome 5748
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccttcctaat
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCAAATGCCTGCAGAGCATTACCACTCCGGTTCGAATC
CGGACCTTGGCTtct
Downstream region at tRNA end position 
cgttttcaag
Secondary structure (Cloverleaf model)
>WENV170670483	Cys	GCA
                   t      Ttct cgttttcaag
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     ACCAC
                    A - T
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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