The detailed information of tRNA gene sequence


Sequence ID>WENV170670523
Genome IDLAHT01032085
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1250
End posion on genome 1323
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ggctcatgtc
tRNA gene sequence 
GCCTCGATAGCTTAGCTCGGTATAGCGCGTCCTTGGTAAGGACGAGGTCGCGGGTTCGAA
TCCCGCCCGAGGCTtat
Downstream region at tRNA end position 
ttttgtgcaa
Secondary structure (Cloverleaf model)
>WENV170670523	Thr	GGT
                   c      Ttat ttttgtgcaa
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A   C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     G
    T       T T C G       G C G G G     C
    C         | | |                 T T
    G       T A G C
      G T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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