The detailed information of tRNA gene sequence


Sequence ID>WENV170670541
Genome IDLAHT01036539
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1356
End posion on genome 1281
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggtctttgtc
tRNA gene sequence 
GGGTGCTTAGCTCAGCTGGTAGAGCGTCGCCCTTACAAGGCGAAGGTCGGGGGTTCGAGC
CCCTCAGCACCCACCA
Downstream region at tRNA end position 
tgtggagtgg
Secondary structure (Cloverleaf model)
>WENV170670541	Val	TAC
                   c      ACCA tgtggagtgg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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