The detailed information of tRNA gene sequence


Sequence ID>WENV170670624
Genome IDLAHT01086737
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 461
End posion on genome 390
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttactactgt
tRNA gene sequence 
GCCAAGGTAGCTTAGAGGCGAAGCGGTGGACTGCAGATCCATTACACGTGAGTTCAAATC
TCTCCCTTGGCTtta
Downstream region at tRNA end position 
aatcatttat
Secondary structure (Cloverleaf model)
>WENV170670624	Cys	GCA
                   t      Ttta aatcatttat
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
        G A        A      |   | | |     A
      A     T T C G       G T G A G     C
      G     | | | |                 T T
      G     A A G C
        C G        G     TACAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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