The detailed information of tRNA gene sequence


Sequence ID>WENV170670642
Genome IDLAHT01100927
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 351
End posion on genome 438
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacgttgtcc
tRNA gene sequence 
GGAGAGCTGTCCGAGTGGTCTATGGTGACTGACTTGAAATCAGTTGGGTGTCACAGCCCC
AGGGGTTCGAATCCTCTGCTCTCCGCCA
Downstream region at tRNA end position 
ggctttatcc
Secondary structure (Cloverleaf model)
>WENV170670642	Ser	TGA
                   c      GCCA ggctttatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     T C T C C     A
      T G A        G      | | + | |     G
    G       G C C T       A G G G G     C
    G       + | |                   T T
    T       T G G T
      C T A        G     TGGGTGTCACAGCCCC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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