The detailed information of tRNA gene sequence


Sequence ID>WENV170670700
Genome IDLAHT01136834
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 338
End posion on genome 414
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccctcgctt
tRNA gene sequence 
GGCGGTGTAGCTCAGCCGGTTAGAGCATACGGCTCATATCCGTAGTGTCCGGGGTTCGAT
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
agacgacaag
Secondary structure (Cloverleaf model)
>WENV170670700	Met	CAT
                   t      ACCA agacgacaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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