The detailed information of tRNA gene sequence


Sequence ID>WENV170670726
Genome IDLAHU01000025
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 171
End posion on genome 100
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acacagcctt
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCGGTTGACTGCAGATCAACTACACTCCGGTTCAAATC
CGGACCTTGGCTttg
Downstream region at tRNA end position 
ggtaatagcg
Secondary structure (Cloverleaf model)
>WENV170670726	Cys	GCA
                   t      Tttg ggtaatagcg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     A
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        G     TACAC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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