The detailed information of tRNA gene sequence


Sequence ID>WENV170670728
Genome IDLAHU01000026
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2299
End posion on genome 2228
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgcacgacct
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCCACGCGGCTGACTGCAGATCAGCTACACTCCGGTTCAAATC
CGGACCTTGGCTttg
Downstream region at tRNA end position 
ggtaatagcg
Secondary structure (Cloverleaf model)
>WENV170670728	Cys	GCA
                   t      Tttg ggtaatagcg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     A
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C C        G     TACAC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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