The detailed information of tRNA gene sequence


Sequence ID>WENV170670755
Genome IDLAHU01000459
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2373
End posion on genome 2450
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
taaaaggttt
tRNA gene sequence 
GGGGTTGTGGGGTAGCCTGGTCCATCCCTCGGCGTTCGGGACGCCGTAACCTGAGTTCGA
ATCTCAGCAACCCCACCA
Downstream region at tRNA end position 
tttgcctttc
Secondary structure (Cloverleaf model)
>WENV170670755	Pro	CGG
                   t      ACCA tttgcctttc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G A C T C     A
    C C G A        G      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | |                 T T
  G         T C C C
    T C C A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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