The detailed information of tRNA gene sequence


Sequence ID>WENV170670758
Genome IDLAHU01000467
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 20638
End posion on genome 20712
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgatgcataa
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTCACACGGCGAAGATCCTGAGTTCGAA
TCTCAGCGAGCCCACtc
Downstream region at tRNA end position 
cctttttctc
Secondary structure (Cloverleaf model)
>WENV170670758	Val	CAC
                   a      ACtc cctttttctc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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