The detailed information of tRNA gene sequence


Sequence ID>WENV170670768
Genome IDLAHU01000690
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 22485
End posion on genome 22412
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gaagaattgc
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCAGGAGTTCGAA
TCTCCTCGAGCCCAttc
Downstream region at tRNA end position 
gttcctctca
Secondary structure (Cloverleaf model)
>WENV170670768	Val	GAC
                   c      Attc gttcctctca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C T C     A
      C G A        G      | | | | |     G
    T       T C T G       A G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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