The detailed information of tRNA gene sequence


Sequence ID>WENV170670773
Genome IDLAHU01000770
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3558
End posion on genome 3645
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagggtcaga
tRNA gene sequence 
GTCGAGGTCGCCTAGCTTGGTATGGCGCAGGTTTGCTAAACCTGTTCCGCTCCGCGGATC
GTGGGTTCGAATCCCACCCTCGGCGCTA
Downstream region at tRNA end position 
ttttaccagt
Secondary structure (Cloverleaf model)
>WENV170670773	Ser	GCT
                   a      GCTA ttttaccagt
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    T       T C C G       G T G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TTCCGCTCCGCGGATC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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