The detailed information of tRNA gene sequence


Sequence ID>WENV170670800
Genome IDLAHU01001587
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 8434
End posion on genome 8359
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagaatgtac
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGC
CTCTCCTCCCGTGCGA
Downstream region at tRNA end position 
aacggaattc
Secondary structure (Cloverleaf model)
>WENV170670800	Trp	CCA
                   c      GCGA aacggaattc
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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