The detailed information of tRNA gene sequence


Sequence ID>WENV170670803
Genome IDLAHU01001636
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 5586
End posion on genome 5509
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccatttacgc
tRNA gene sequence 
GGGGTCGTAGTTAAGCCTGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCGAGTTCAA
TTCTCGTCGACCCCGCCA
Downstream region at tRNA end position 
ttttaatctg
Secondary structure (Cloverleaf model)
>WENV170670803	Asp	GTC
                   c      GCCA ttttaatctg
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T T
                    T     T G C T C     A
    C C G A        A      + | | | |     A
  T         A T T G       G C G A G     C
  G         | | | |                 T T
  G         T A A C
    T T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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