The detailed information of tRNA gene sequence


Sequence ID>WENV170670805
Genome IDLAHU01001681
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2000
End posion on genome 1925
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caaaatgtac
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGC
CTCTCCTCCCGTGCAA
Downstream region at tRNA end position 
aattgaagtc
Secondary structure (Cloverleaf model)
>WENV170670805	Trp	CCA
                   c      GCAA aattgaagtc
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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