The detailed information of tRNA gene sequence


Sequence ID>WENV170670815
Genome IDLAHU01001836
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 580
End posion on genome 658
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacgcttctT
tRNA gene sequence 
GGGCCTGTAGCTTAGTCCGGTTAGAGCGCTCGGCTCATAACCGAGTGGTCGCCGGTTCAA
ATCCGGCCAGGCCCATCC
Downstream region at tRNA end position 
tcaataatca
Secondary structure (Cloverleaf model)
>WENV170670815	Met	CAT
                   T      ATCC tcaataatca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G G C C     A
    C T G A        A      | | | | |     A
  C         T T C G       G C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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