The detailed information of tRNA gene sequence


Sequence ID>WENV170670817
Genome IDLAHU01001845
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 23418
End posion on genome 23345
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggtacaggac
tRNA gene sequence 
GGGGCCATAGGGTAGCCTGGCCATCCTAGGAGACTGGGGGTCTTCTGACCTGCGTTCAAA
TCGCGGTGGCCCCAtcc
Downstream region at tRNA end position 
atactctttt
Secondary structure (Cloverleaf model)
>WENV170670817	Pro	TGG
                   c      Atcc atactctttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G C G C     A
      C G A        A      | + | | |     A
    C       T G G G       C T G C G     C
    T       | + | |                 T T
    G       A T C C
      G C C        T     CTGAC
                    A - T
                    G + T
                    G - C
                    A - T
                    G   G
                  A       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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