The detailed information of tRNA gene sequence


Sequence ID>WENV170670819
Genome IDLAHU01001864
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 12058
End posion on genome 11982
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcattcctcT
tRNA gene sequence 
GGGCCTGTAGCTTAGTCCGGTTAGAGCGCTCGGCTCATAACCGAGTGGCCGCCGGTTCAA
ATCCGGCCAGGCCCATgc
Downstream region at tRNA end position 
tggcaactat
Secondary structure (Cloverleaf model)
>WENV170670819	Met	CAT
                   T      ATgc tggcaactat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G G C C     A
    C T G A        A      | | | | |     A
  C         T T C G       G C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     TGGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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