The detailed information of tRNA gene sequence


Sequence ID>WENV170670841
Genome IDLAHU01002264
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 25181
End posion on genome 25094
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gattccaccT
tRNA gene sequence 
GTTGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCTCTGGGACTC
GAGGGTTCAAATCCCTCCCTCAGCGTCt
Downstream region at tRNA end position 
gcaggaactc
Secondary structure (Cloverleaf model)
>WENV170670841	Ser	GCT
                   T      GTCt gcaggaactc
                     G - C
                     T + G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCTCTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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