The detailed information of tRNA gene sequence


Sequence ID>WENV170670845
Genome IDLAHU01002391
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 4165
End posion on genome 4089
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccgaaccggT
tRNA gene sequence 
CGGGATGTAGCGCAGTCCGGTTAGCGCGCTCGGTTCGGGACCGAGAAGTCGGAGGTTCAA
ATCCTCTCATCCCGAGta
Downstream region at tRNA end position 
gctcagtcgg
Secondary structure (Cloverleaf model)
>WENV170670845	Pro	CGG
                   T      AGta gctcagtcgg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AAGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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