The detailed information of tRNA gene sequence


Sequence ID>WENV170670851
Genome IDLAHU01002560
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 12559
End posion on genome 12634
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tgtaactccT
tRNA gene sequence 
GCCTCAGTAGCTCAGACTGGGAGAGCGCCAGACTGAAGATCTGGTTGTCCCCGGTTCAAA
TCCGGGCTGGGGCATat
Downstream region at tRNA end position 
tggcaccatt
Secondary structure (Cloverleaf model)
>WENV170670851	Phe	GAA
                   T      ATat tggcaccatt
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T A
                    T     G G G C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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