The detailed information of tRNA gene sequence


Sequence ID>WENV170670858
Genome IDLAHU01002617
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 22261
End posion on genome 22334
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aattaggaaa
tRNA gene sequence 
GGGCCCGTAGCATAGCCAGGTGGTGCGCCCGGCTGATAACCGGGAGGTCATGTGTTCGAA
TCACATCGGGCCCAtct
Downstream region at tRNA end position 
ctctttcatc
Secondary structure (Cloverleaf model)
>WENV170670858	Ile	GAT
                   a      Atct ctctttcatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C A C     A
      C G A        A      | | | | |     G
    C       T A C G       A T G T G     C
    A       + | | |                 T T
    G       G T G C
      G T G        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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