The detailed information of tRNA gene sequence


Sequence ID>WENV170670862
Genome IDLAHU01002709
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 198
End posion on genome 112
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttaatagggT
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGCAGACGCGCTAGATTCAGGGTCTAGTAGGCAATTTGCCTGT
GTGGGTTCAAGTCCCGTCTTCGGCATtt
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV170670862	Leu	CAG
                   T      ATtt tttttatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T A A        G      + + | | |     A
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TAGGCAATTTGCCTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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