The detailed information of tRNA gene sequence


Sequence ID>WENV170670884
Genome IDLAHU01003282
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3027
End posion on genome 2951
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgtgccacgt
tRNA gene sequence 
CGGGATGTGGCCCAGCTTGGTAGGGCACTGCGTTCGGGACGCAGGAGTCGCGCGTTCAAA
TCGCGCCATCCCGACCA
Downstream region at tRNA end position 
ttttttatcc
Secondary structure (Cloverleaf model)
>WENV170670884	Pro	CGG
                   t      ACCA ttttttatcc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C G C G C     A
      C G A        G      | | | | |     A
    T       C C C G       G C G C G     C
    T       | | | |                 T T
    G       G G G C
      G T A        A     GAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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