The detailed information of tRNA gene sequence


Sequence ID>WENV170670902
Genome IDLAHU01003762
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 841
End posion on genome 756
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctatatccgg
tRNA gene sequence 
GCCGGGGTAGTCTAGACCGGTAAGGCGGTGGCCTTGAAAGCCACTGGTGCCATGCACCTC
AAGAGTTCAAATCTCTTCCCCGGCGCtt
Downstream region at tRNA end position 
tcactttttt
Secondary structure (Cloverleaf model)
>WENV170670902	Ser	TGA
                   g      GCtt tcactttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      A G A        A      | | | | |     A
    C       T C T G       A A G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCATGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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