The detailed information of tRNA gene sequence


Sequence ID>WENV170670915
Genome IDLAHU01004512
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1171
End posion on genome 1243
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
aggatattac
tRNA gene sequence 
AGCCCGGTAGTGTAGCGGTCAATCATGCGGGACTCTGGATCCCGCGACAGCAGTTCGAAT
CTGCTCCGGGCTAtta
Downstream region at tRNA end position 
attatccttt
Secondary structure (Cloverleaf model)
>WENV170670915	Gln	CTG
                   c      Atta attatccttt
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C G T C     A
      C G A        A      | | | | |     G
    G       T G T G       A G C A G     C
    G         | | +                 T T
    T       T C A T
      C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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