The detailed information of tRNA gene sequence


Sequence ID>WENV170670947
Genome IDLAHU01005946
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 9066
End posion on genome 8992
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atatgcatcT
tRNA gene sequence 
GTCCGGATGGTGTAGTGGCCCATCATGAAAGCCTGTCGAGCTTTCGACCCGGGTTCGAAT
CCCGGTCCGGGCGTta
Downstream region at tRNA end position 
tttacttgga
Secondary structure (Cloverleaf model)
>WENV170670947	Asp	GTC
                   T      GTta tttacttgga
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | +                 T T
    C       T C A T
      C C A        G     CGAC
                    A - T
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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