The detailed information of tRNA gene sequence


Sequence ID>WENV170670960
Genome IDLAHU01006428
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 97
End posion on genome 174
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caactcaaaT
tRNA gene sequence 
GGGCCCGTAGCTCAGACTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGCCCCGGGTTCAAA
TCCCGGTGGGTCCATCC
Downstream region at tRNA end position 
tattttaata
Secondary structure (Cloverleaf model)
>WENV170670960	Ala	TGC
                   T      ATCC tattttaata
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G + T          T A
                    T     G G C C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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