The detailed information of tRNA gene sequence


Sequence ID>WENV170670961
Genome IDLAHU01006430
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2611
End posion on genome 2684
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcttgtataa
tRNA gene sequence 
GGGCTGGTAGCTCAGGTTGGTAGAGCGTCGCCTTGGCATGGCGGAGGCCCCGGGTTCAAA
TCCCGGCCAGTCCAtcc
Downstream region at tRNA end position 
ttattttttc
Secondary structure (Cloverleaf model)
>WENV170670961	Ala	GGC
                   a      Atcc ttattttttc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
      G G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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